STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g7178W2 domain-containing protein. (426 aa)    
Predicted Functional Partners:
B7463_g3377
S1 motif domain-containing protein; Belongs to the cytochrome P450 family.
   
 0.997
B7463_g1135
Tr-type G domain-containing protein.
   
 0.997
B7463_g12302
PCI domain-containing protein; Belongs to the eIF-3 subunit C family.
   
 0.996
B7463_g4469
eIF2B_5 domain-containing protein.
   
0.996
B7463_g10816
Eukaryotic translation initiation factor 3 subunit B.
   
 0.991
B7463_g6440
Eukaryotic translation initiation factor 3 subunit I.
   
 0.989
B7463_g4548
Eukaryotic translation initiation factor 3 subunit A.
   
 0.989
B7463_g133
RRM domain-containing protein.
   
 0.989
B7463_g9603
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.984
B7463_g5337
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.981
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.