STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g6175Ubiquitin-like domain-containing protein. (296 aa)    
Predicted Functional Partners:
B7463_g481
SH3 domain-containing protein.
    
 0.999
B7463_g8279
GAE domain-containing protein.
   
 0.960
B7463_g4823
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.952
B7463_g7186
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.951
B7463_g1133
Uncharacterized protein.
   
 0.951
B7463_g1921
Alpha_adaptinC2 domain-containing protein.
   
 0.925
B7463_g1683
Uncharacterized protein.
   
 0.914
B7463_g6367
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.873
B7463_g357
Uncharacterized protein.
    
 0.839
B7463_g367
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.839
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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