STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g6221Cupin_2 domain-containing protein. (125 aa)    
Predicted Functional Partners:
B7463_g323
Ribosomal_L2_C domain-containing protein.
   
   0.716
B7463_g10175
Uncharacterized protein.
   
 
 0.669
B7463_g4491
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.653
B7463_g1805
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.651
B7463_g11719
Uncharacterized protein.
   
 
 0.647
B7463_g12007
Uncharacterized protein.
   
 
 0.644
B7463_g7248
Uncharacterized protein.
   
   0.636
B7463_g9433
Uncharacterized protein.
   
 
 0.635
B7463_g7249
Uncharacterized protein.
   
   0.633
B7463_g2107
Uncharacterized protein.
   
   0.633
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.