STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g5478Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
B7463_g1208
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
    
  0.892
B7463_g4668
Ribosomal_S7 domain-containing protein.
   
 
 0.875
B7463_g163
Uncharacterized protein.
   
 
 0.872
B7463_g1805
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.871
B7463_g5306
Uncharacterized protein.
   
 
 0.865
B7463_g9966
Uncharacterized protein.
   
 
 0.862
B7463_g4676
Uncharacterized protein.
   
 
 0.855
B7463_g4154
Uncharacterized protein.
   
 
 0.855
B7463_g6417
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.853
B7463_g12611
Uncharacterized protein.
   
 
 0.839
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.