STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g5775Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (272 aa)    
Predicted Functional Partners:
B7463_g11022
Uncharacterized protein.
    
 0.756
B7463_g450
Uncharacterized protein.
     
 0.657
B7463_g12226
Peroxisomal membrane protein PEX16.
     
 0.655
B7463_g1988
TPR_REGION domain-containing protein.
     
 0.628
B7463_g10954
SH3 domain-containing protein.
     
 0.609
B7463_g6429
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.602
B7463_g704
RING-type domain-containing protein.
     
 0.590
B7463_g670
AAA domain-containing protein; Belongs to the AAA ATPase family.
     
 0.590
B7463_g10810
RING-type domain-containing protein.
     
 0.583
B7463_g4569
RING-type domain-containing protein.
     
 0.583
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.