STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g5316Elongation of fatty acids protein. (467 aa)    
Predicted Functional Partners:
B7463_g8054
Cytochrome b5 heme-binding domain-containing protein.
 
  
 0.863
B7463_g5846
Cytochrome b5 heme-binding domain-containing protein.
 
  
 0.863
B7463_g4734
Cytochrome b5 heme-binding domain-containing protein.
 
  
 0.863
B7463_g3525
S5A_REDUCTASE domain-containing protein.
    
 0.842
B7463_g9962
Uncharacterized protein.
    
 0.813
B7463_g9664
PKS_KS domain-containing protein.
     
 0.735
B7463_g8997
FA_desaturase domain-containing protein.
     
 0.701
B7463_g4357
Cytochrome b5 heme-binding domain-containing protein.
     
 0.701
B7463_g7486
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 0.637
B7463_g5332
APH domain-containing protein.
    
 0.637
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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