STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g5312Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
B7463_g9067
Tr-type G domain-containing protein.
  
 
 0.955
B7463_g12640
Uncharacterized protein.
  
   0.936
B7463_g655
RRN7-type domain-containing protein.
   
 
 0.926
B7463_g9835
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.846
B7463_g11824
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.826
B7463_g11115
Ribosomal_L14e domain-containing protein.
   
 
 0.818
B7463_g1750
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.818
B7463_g323
Ribosomal_L2_C domain-containing protein.
 
 
   0.814
B7463_g1130
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.813
B7463_g7765
Tr-type G domain-containing protein.
  
 
 0.804
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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