STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4981Uncharacterized protein. (860 aa)    
Predicted Functional Partners:
B7463_g10935
WD_REPEATS_REGION domain-containing protein.
   
   0.963
B7463_g1779
Uncharacterized protein.
   
 
 0.959
B7463_g2707
Uncharacterized protein.
   
   0.945
B7463_g10771
Uncharacterized protein.
   
   0.937
B7463_g672
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.937
B7463_g4354
MI domain-containing protein.
   
   0.931
B7463_g5611
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
   0.920
B7463_g902
Ribosomal_L28e domain-containing protein.
   
   0.900
B7463_g5512
Uncharacterized protein.
   
 
 0.838
B7463_g12029
Uncharacterized protein.
    
 
 0.831
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.