STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4940CoA_binding domain-containing protein. (659 aa)    
Predicted Functional Partners:
B7463_g4941
Citrate_bind domain-containing protein.
 
 
 0.997
B7463_g12023
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
  
0.977
B7463_g6336
CoA_binding domain-containing protein.
  
0.977
B7463_g3682
Citrate synthase; Belongs to the citrate synthase family.
  
 0.962
B7463_g3523
Citrate synthase; Belongs to the citrate synthase family.
  
 0.962
B7463_g12249
Transket_pyr domain-containing protein.
  
 0.957
B7463_g2720
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.946
B7463_g12525
Citrate synthase; Belongs to the citrate synthase family.
  
 0.945
B7463_g7878
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.940
B7463_g4541
Uncharacterized protein.
  
 0.939
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.