STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4966Uncharacterized protein. (611 aa)    
Predicted Functional Partners:
B7463_g8496
Tryptophan synthase.
 
   
 0.766
B7463_g12751
Uncharacterized protein.
    
 0.518
B7463_g7795
Methyltransf_25 domain-containing protein.
    
 0.518
B7463_g7608
Uncharacterized protein.
    
 0.518
B7463_g5967
Methyltransf_25 domain-containing protein.
    
 0.518
B7463_g648
Uncharacterized protein.
    
 0.474
B7463_g1240
Uncharacterized protein.
   
 0.464
B7463_g5619
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.461
B7463_g4472
Uncharacterized protein.
     
 0.416
B7463_g11896
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.414
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.