STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4582Alpha-galactosidase. (536 aa)    
Predicted Functional Partners:
B7463_g5081
Alpha-galactosidase.
  
  
 
0.782
B7463_g10383
Uncharacterized protein.
   
 
 0.778
B7463_g3874
Uncharacterized protein.
   
 
 0.778
B7463_g9714
Uncharacterized protein.
   
 
 0.769
B7463_g9019
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
   
 
 0.769
B7463_g3002
Uncharacterized protein.
     
 0.763
B7463_g917
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.762
B7463_g6828
Glyco_hydro_20 domain-containing protein.
     
 0.622
B7463_g2319
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.571
B7463_g8128
P/Homo B domain-containing protein.
   
  0.525
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.