STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4232Oxidored_FMN domain-containing protein. (347 aa)    
Predicted Functional Partners:
B7463_g4614
Fumarate reductase; Irreversibly catalyzes the reduction of fumarate to succinate.
   
  0.905
B7463_g11426
Cytochrome b5 heme-binding domain-containing protein.
   
  0.821
B7463_g1477
ETF domain-containing protein.
  
 
 0.495
B7463_g11105
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
  0.453
B7463_g693
ETF domain-containing protein.
   
 
 0.439
B7463_g10287
Uncharacterized protein.
   
  0.418
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.