STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g4110Uncharacterized protein. (800 aa)    
Predicted Functional Partners:
B7463_g8444
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.997
B7463_g2968
Uncharacterized protein.
   
 0.997
B7463_g5019
Cog4 domain-containing protein.
    
 0.995
B7463_g4843
Uncharacterized protein.
   
 0.959
B7463_g1065
COG2 domain-containing protein.
   
 0.959
B7463_g1046
t-SNARE coiled-coil homology domain-containing protein.
     
 0.814
B7463_g8455
Uncharacterized protein.
   
 
 0.808
B7463_g9652
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
 0.797
B7463_g3626
Thioredoxin-disulfide reductase.
     
 0.785
B7463_g657
Uncharacterized protein.
   
 
 0.780
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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