STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g3620Uncharacterized protein. (875 aa)    
Predicted Functional Partners:
B7463_g12566
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.859
B7463_g6334
Ubiquitin-like domain-containing protein.
   
 0.848
B7463_g5362
D-aminoacyl-tRNA deacylase.
    
 0.837
B7463_g9961
Uncharacterized protein.
   
 0.834
B7463_g2001
Uncharacterized protein.
   
 0.825
B7463_g252
NUP214 domain-containing protein.
    
 0.823
B7463_g2764
Uncharacterized protein.
   
 0.812
B7463_g6333
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.809
B7463_g6272
Uncharacterized protein.
    
 0.805
B7463_g6617
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.802
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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