STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g3259SET domain-containing protein. (843 aa)    
Predicted Functional Partners:
B7463_g2758
Succinate-CoA ligase subunit beta.
   
 0.796
B7463_g7459
MINDY_DUB domain-containing protein.
    
 0.773
B7463_g4941
Citrate_bind domain-containing protein.
   
 0.714
B7463_g4940
CoA_binding domain-containing protein.
   
 0.714
B7463_g12023
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 
 0.642
B7463_g6336
CoA_binding domain-containing protein.
   
 
 0.642
B7463_g2459
Uncharacterized protein.
     
 0.642
B7463_g311
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.634
B7463_g12737
Lipoyl-binding domain-containing protein.
   
 
 0.623
B7463_g7878
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
 0.623
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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