STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2976Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
B7463_g1702
Uncharacterized protein.
    
 0.624
B7463_g8552
SMN domain-containing protein.
    
 0.607
B7463_g9157
DNA polymerase.
   
 0.592
B7463_g8903
ERCC4 domain-containing protein.
    
 0.589
B7463_g7547
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.578
B7463_g9064
Small nuclear ribonucleoprotein Sm D2.
    
 0.568
B7463_g7973
Small nuclear ribonucleoprotein G.
    
  0.556
B7463_g1723
3'-5' exonuclease domain-containing protein.
     
 0.530
B7463_g6651
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.513
B7463_g1080
WD_REPEATS_REGION domain-containing protein.
    
  0.509
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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