STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2923GYF domain-containing protein. (482 aa)    
Predicted Functional Partners:
B7463_g4318
Uncharacterized protein.
   
 
 0.979
B7463_g12111
Uncharacterized protein.
   
 
 0.933
B7463_g4047
Uncharacterized protein.
   
 
 0.926
B7463_g2035
MPN domain-containing protein.
    
 
 0.916
B7463_g7976
Tr-type G domain-containing protein.
    
 
 0.911
B7463_g1129
Sm domain-containing protein.
    
 
 0.910
B7463_g10937
Uncharacterized protein.
   
 
 0.902
B7463_g9639
Uncharacterized protein.
    
 
 0.849
B7463_g2675
Uncharacterized protein.
    
 
 0.849
B7463_g11740
Sm domain-containing protein.
    
 
 0.838
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.