STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2844Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (347 aa)    
Predicted Functional Partners:
B7463_g12012
Uncharacterized protein.
  
 0.911
B7463_g2982
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.895
B7463_g8496
Tryptophan synthase.
    
 0.876
B7463_g12353
Diphosphomevalonate decarboxylase.
  
 0.865
B7463_g174
GHMP_kinases_N domain-containing protein.
  
 0.865
B7463_g7152
Nudix hydrolase domain-containing protein.
 
 
 0.864
B7463_g5619
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.853
B7463_g2909
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.839
B7463_g1935
Chromatin modification-related protein.
  
 
 0.839
B7463_g4703
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.826
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.