STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2388Saposin B-type domain-containing protein. (640 aa)    
Predicted Functional Partners:
B7463_g5039
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.726
B7463_g10275
NAAA-beta domain-containing protein.
   
 0.714
B7463_g5634
Uncharacterized protein.
     
 0.710
B7463_g1060
Uncharacterized protein.
 
      0.653
B7463_g4927
Peroxidase.
     
 0.625
B7463_g7648
Neutral ceramidase.
     
 0.605
B7463_g1485
Uncharacterized protein.
     
 0.605
B7463_g3243
DAGKc domain-containing protein.
    
 0.560
B7463_g8480
CSN8_PSD8_EIF3K domain-containing protein.
    
 0.520
B7463_g1310
DAGKc domain-containing protein.
    
 0.520
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.