STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2566Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (324 aa)    
Predicted Functional Partners:
B7463_g7207
ENDO3c domain-containing protein.
   
 0.894
B7463_g2554
Uncharacterized protein; Belongs to the actin family.
 
 
    0.891
B7463_g4261
CPSF_A domain-containing protein.
    
 
 0.871
B7463_g1890
Endo/exonuclease/phosphatase domain-containing protein.
   
 0.871
B7463_g1731
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.869
B7463_g6651
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.810
B7463_g7154
J domain-containing protein.
   
 
 0.767
B7463_g5032
AP_endonuc_2 domain-containing protein.
   
 
 0.745
B7463_g2902
Uncharacterized protein.
   
  
 0.676
B7463_g11088
Uncharacterized protein.
   
 
 0.667
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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