STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g2295Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
B7463_g478
Uncharacterized protein.
    
 0.629
B7463_g5034
Uncharacterized protein.
    
 0.594
B7463_g5160
Uncharacterized protein.
    
 0.593
B7463_g12501
ANK_REP_REGION domain-containing protein.
   
  0.534
B7463_g10726
Uncharacterized protein.
    
 
 0.532
B7463_g366
GOLD domain-containing protein.
    
 0.506
B7463_g8128
P/Homo B domain-containing protein.
   
 
 0.503
B7463_g9460
Uncharacterized protein.
    
 0.498
B7463_g9364
Uncharacterized protein.
    
 0.498
B7463_g53
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.498
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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