B7463_g2170 protein (Scytalidium lignicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B7463_g2170

GST C-terminal domain-containing protein. (330 aa)

Predicted Functional Partners:

B7463_g2965

0.522

B7463_g5112

0.478

B7463_g6304

0.475

B7463_g6953

0.473

B7463_g7611

0.440

B7463_g5604

0.440

B7463_g9546

0.410

B7463_g3965

0.410

B7463_g3960

0.410

B7463_g434

0.410

Your Current Organism:

Scytalidium lignicola

NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7463_g2170	B7463_g2965	A0A3E2HLZ3	A0A3E2HJB0	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.522
B7463_g2170	B7463_g3960	A0A3E2HLZ3	A0A3E2HH15	GST C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.410
B7463_g2170	B7463_g3965	A0A3E2HLZ3	A0A3E2HG18	GST C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.410
B7463_g2170	B7463_g434	A0A3E2HLZ3	A0A3E2HR33	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.410
B7463_g2170	B7463_g5112	A0A3E2HLZ3	A0A3E2HCT5	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.478
B7463_g2170	B7463_g5604	A0A3E2HLZ3	A0A3E2HBE5	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.440
B7463_g2170	B7463_g6304	A0A3E2HLZ3	A0A3E2HA65	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.475
B7463_g2170	B7463_g6953	A0A3E2HLZ3	A0A3E2H7J7	GST C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the tubulin family.	0.473
B7463_g2170	B7463_g7611	A0A3E2HLZ3	A0A3E2H6L8	GST C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.440
B7463_g2170	B7463_g9546	A0A3E2HLZ3	A0A3E2H0B3	GST C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.410
B7463_g2965	B7463_g2170	A0A3E2HJB0	A0A3E2HLZ3	Uncharacterized protein.	GST C-terminal domain-containing protein.	0.522
B7463_g2965	B7463_g5112	A0A3E2HJB0	A0A3E2HCT5	Uncharacterized protein.	Uncharacterized protein.	0.571
B7463_g2965	B7463_g6304	A0A3E2HJB0	A0A3E2HA65	Uncharacterized protein.	Uncharacterized protein.	0.543
B7463_g2965	B7463_g6953	A0A3E2HJB0	A0A3E2H7J7	Uncharacterized protein.	Uncharacterized protein; Belongs to the tubulin family.	0.713
B7463_g3960	B7463_g2170	A0A3E2HH15	A0A3E2HLZ3	Uncharacterized protein; Belongs to the GST superfamily.	GST C-terminal domain-containing protein.	0.410
B7463_g3960	B7463_g3965	A0A3E2HH15	A0A3E2HG18	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.948
B7463_g3960	B7463_g434	A0A3E2HH15	A0A3E2HR33	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.949
B7463_g3960	B7463_g5604	A0A3E2HH15	A0A3E2HBE5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.478
B7463_g3960	B7463_g7611	A0A3E2HH15	A0A3E2H6L8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.478
B7463_g3960	B7463_g9546	A0A3E2HH15	A0A3E2H0B3	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.948