STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g1730Nup188_C domain-containing protein. (1836 aa)    
Predicted Functional Partners:
B7463_g2764
Uncharacterized protein.
   
 0.995
B7463_g11421
Peptidase S59 domain-containing protein.
   
 0.971
B7463_g4571
Uncharacterized protein.
   
 0.953
B7463_g9961
Uncharacterized protein.
   
 0.950
B7463_g6664
Uncharacterized protein.
  
 0.949
B7463_g64
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.899
B7463_g6333
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.898
B7463_g252
NUP214 domain-containing protein.
    
 
 0.874
B7463_g12035
Uncharacterized protein.
    
 0.843
B7463_g7500
TPR_MLP1_2 domain-containing protein.
    
 0.803
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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