STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g1732BRCT domain-containing protein. (262 aa)    
Predicted Functional Partners:
B7463_g1513
VWFA domain-containing protein.
   
 
 0.889
B7463_g2326
SAP domain-containing protein.
    
 
 0.858
B7463_g2902
Uncharacterized protein.
   
 0.852
B7463_g10134
Uncharacterized protein.
   
 0.808
B7463_g11420
Uncharacterized protein.
    
 0.794
B7463_g11021
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.784
B7463_g6334
Ubiquitin-like domain-containing protein.
    
 0.784
B7463_g8435
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.779
B7463_g6435
Uncharacterized protein.
   
 0.777
B7463_g710
Uncharacterized protein.
   
 0.777
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (28%) [HD]