STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g1474Uncharacterized protein. (842 aa)    
Predicted Functional Partners:
B7463_g11140
Uncharacterized protein.
   
 0.810
B7463_g5005
Uncharacterized protein.
   
 0.810
B7463_g4325
Uncharacterized protein.
    
 0.785
B7463_g2314
Galactose-1-phosphate uridylyltransferase.
    
 0.764
B7463_g737
WD_REPEATS_REGION domain-containing protein.
    
 0.684
B7463_g1080
WD_REPEATS_REGION domain-containing protein.
    
 0.654
B7463_g9698
WD_REPEATS_REGION domain-containing protein.
    
 0.646
B7463_g1484
B30.2/SPRY domain-containing protein.
    
 0.646
B7463_g655
RRN7-type domain-containing protein.
    
  0.632
B7463_g12028
Histone H2B; Belongs to the histone H2B family.
    
 0.627
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.