STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g1263Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
B7463_g5965
PKS_ER domain-containing protein.
     
 0.646
B7463_g2720
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.580
B7463_g2758
Succinate-CoA ligase subunit beta.
 
  
  0.562
B7463_g7045
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.474
B7463_g5936
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.474
B7463_g1502
Thiolase_C domain-containing protein.
  
 
 0.474
B7463_g12717
AB hydrolase-1 domain-containing protein.
   
 
  0.445
B7463_g9909
AB hydrolase-1 domain-containing protein.
   
 
  0.445
B7463_g9048
AB hydrolase-1 domain-containing protein.
   
 
  0.445
B7463_g6489
AB hydrolase-1 domain-containing protein.
   
 
  0.445
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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