STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g513Histone domain-containing protein. (117 aa)    
Predicted Functional Partners:
B7463_g12028
Histone H2B; Belongs to the histone H2B family.
 
 
 0.990
B7463_g280
BAH domain-containing protein.
    
 
 0.988
B7463_g10191
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 0.966
B7463_g12735
Histone H2A; Belongs to the histone H2A family.
 
 0.965
B7463_g12178
Histone H2A; Belongs to the histone H2A family.
 
 
 0.950
B7463_g3101
Uncharacterized protein.
 
 
 0.929
B7463_g1080
WD_REPEATS_REGION domain-containing protein.
   
 0.926
B7463_g2750
Uncharacterized protein.
    
 0.925
B7463_g205
Uncharacterized protein.
   
 0.922
B7463_g11821
GATA-type domain-containing protein.
    
 0.919
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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