STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g441Protein YOP1. (171 aa)    
Predicted Functional Partners:
B7463_g2972
GB1/RHD3-type G domain-containing protein.
    
 
 0.873
B7463_g9293
Reticulon-like protein.
    
 
 0.797
B7463_g6614
ML domain-containing protein.
   
    0.622
B7463_g7755
Zinc_ribbon_10 domain-containing protein.
    
 
 0.573
B7463_g3718
Protein YIP.
    
 
 0.553
B7463_g12076
Peroxin/Ferlin domain-containing protein.
    
 
 0.531
B7463_g5
Protein YOP1.
  
 
 
0.516
B7463_g5165
Uncharacterized protein.
    
 
 0.486
B7463_g12035
Uncharacterized protein.
    
 
 0.450
B7463_g12549
Uncharacterized protein.
      
 0.447
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.