STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g295CBFD_NFYB_HMF domain-containing protein. (254 aa)    
Predicted Functional Partners:
B7463_g9716
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.998
B7463_g194
DNA_pol_E_B domain-containing protein.
    
 0.995
B7463_g4269
Uncharacterized protein.
    
 0.982
B7463_g519
CBFD_NFYB_HMF domain-containing protein.
    
 0.978
B7463_g1723
3'-5' exonuclease domain-containing protein.
    
 0.957
B7463_g6435
Uncharacterized protein.
    
 0.943
B7463_g6624
Uncharacterized protein.
    
 
 0.940
B7463_g501
DNA polymerase.
   
 0.911
B7463_g9157
DNA polymerase.
   
 0.910
B7463_g710
Uncharacterized protein.
    
 0.909
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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