STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g384Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
B7463_g8496
Tryptophan synthase.
    
  0.761
B7463_g4481
Glucanase; Belongs to the glycosyl hydrolase family 6.
 
    
 0.610
B7463_g2823
Uncharacterized protein.
    
 0.603
B7463_g8011
Uncharacterized protein.
   
 0.527
B7463_g1448
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.527
B7463_g6429
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.515
B7463_g8619
Uncharacterized protein; Belongs to the FGGY kinase family.
   
 
 0.508
B7463_g9298
Uncharacterized protein.
    
 0.506
B7463_g6244
Uncharacterized protein.
   
 
 0.466
B7463_g9962
Uncharacterized protein.
   
 
  0.459
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.