STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g376Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
B7463_g1731
Glutamine amidotransferase type-1 domain-containing protein.
 
 0.999
B7463_g2276
Uncharacterized protein.
 0.998
B7463_g9629
Glutamine amidotransferase type-1 domain-containing protein.
 
 0.997
B7463_g8496
Tryptophan synthase.
 
 0.997
B7463_g3075
PRA-CH domain-containing protein.
 
  
 0.951
B7463_g4275
Uncharacterized protein.
  
 
 0.896
B7463_g12306
Prephenate/arogenate dehydrogenase domain-containing protein.
    
 0.893
B7463_g8941
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
    
 0.893
B7463_g459
Prephenate dehydratase domain-containing protein.
  
 
 0.866
B7463_g9684
Uncharacterized protein.
  
 
 0.847
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.