STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7463_g240CFEM domain-containing protein. (223 aa)    
Predicted Functional Partners:
B7463_g3520
Uncharacterized protein.
    
   0.717
B7463_g8027
Uncharacterized protein.
    
 0.669
B7463_g7107
Uncharacterized protein.
    
 0.666
B7463_g7888
Uncharacterized protein.
    
   0.601
B7463_g7675
Uncharacterized protein.
   
   0.597
B7463_g1970
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.592
B7463_g12305
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.589
B7463_g2435
CAP10 domain-containing protein; Belongs to the universal ribosomal protein uS8 family.
   
   0.585
B7463_g1768
Uncharacterized protein.
   
   0.585
B7463_g37
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.577
Your Current Organism:
Scytalidium lignicola
NCBI taxonomy Id: 5539
Other names: CBS 233.57, IMI 062532, MUCL 4172, S. lignicola, UAMH 385
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