STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG75546.1Hypothetical protein; KEGG: wbr:WGLp123 0.0028 hemG; protoporphyrinogen oxidase K00230. (168 aa)    
Predicted Functional Partners:
EEG75545.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.859
EEG72965.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.461
EEG74439.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.449
ybiT_3
KEGG: pen:PSEEN3176 4.4e-138 ABC transporte, ATP binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.446
hemN
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.410
hemZ
KEGG: cpe:CPE1935 1.3e-83 hemZ; probable coproporphyrinogen III oxidase K02495; Psort location: Cytoplasmic, score: 9.98.
    
 0.410
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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