STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG74459.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lmf:LMOf2365_2659 8.6e-71 kdpD; sensor histidine kinase KdpD K07646; Psort location: CytoplasmicMembrane, score: 10.00. (475 aa)    
Predicted Functional Partners:
kdpE_2
Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 3.9e-50 kdpE; transcriptional regulatory protein KdpE K07667; Psort location: Cytoplasmic, score: 9.98.
 0.983
kdpE_1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 8.5e-48 kdpE; transcriptional regulatory protein KdpE K07667; Psort location: Cytoplasmic, score: 9.98.
 0.969
kdpC
K+-transporting ATPase, C subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
 
  
 0.913
arcB_3
Diguanylate cyclase (GGDEF) domain protein; KEGG: syn:slr2104 3.0e-72 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
0.902
cph2_3
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 1.2e-50 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 9.98.
 
 0.900
luxQ_3
Hypothetical protein; KEGG: rba:RB13112 4.4e-60 sensory transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
 
0.898
kdpB
K+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.
 
  
 0.898
EEG75388.1
Putative phage prohead protease, HK97 family; KEGG: cvi:CV0882 3.7e-93 probable sensor/response regulator hybrid protein; Psort location: CytoplasmicMembrane, score: 9.49.
0.896
rcsC
PAS domain S-box protein; KEGG: azo:azo2482 3.4e-91 putative hybrid sensor and regulator; Psort location: CytoplasmicMembrane, score: 9.49.
 
0.892
rpfC_1
PAS domain S-box protein; KEGG: dar:Daro_0232 3.9e-60 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal; Psort location: CytoplasmicMembrane, score: 9.49.
 
0.892
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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