STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG74240.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (312 aa)    
Predicted Functional Partners:
EEG74239.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
  0.968
EEG74238.1
Transcriptional regulator, PadR family.
 
     0.807
EEG72959.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.676
EEG73844.1
Efflux transporter, RND family, MFP subunit; KEGG: mma:MM1325 9.9e-06 cheA; chemotaxis protein K03407; Psort location: Cytoplasmic, score: 8.87.
  
    0.631
EEG72486.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.625
EEG75012.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.600
EEG72860.1
PspC domain protein.
  
  
 0.597
EEG73440.1
Hypothetical protein.
  
     0.589
EEG75048.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.571
EEG74235.1
KEGG: pen:PSEEN3665 8.2e-18 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.559
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.