STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG73560.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (486 aa)    
Predicted Functional Partners:
EEG73559.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.730
EEG73557.1
Glycosyltransferase, group 1 family protein; KEGG: ctc:CTC02266 6.6e-23 glycosyl transferase K00754; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.675
EEG73561.1
Glycosyl hydrolase family 25; KEGG: spd:SPD_1403 1.2e-28 lytC; 1,4-beta-N-acetylmuramidase, putative K01227; Psort location: Extracellular, score: 9.55.
       0.675
EEG73558.1
Glycosyltransferase, group 2 family protein; KEGG: lsl:LSL_1560 1.3e-28 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.673
EEG73556.1
Asparagine synthase; KEGG: wsu:WS0046 7.9e-14 glmS; galactosyl transferase, gdp-mannose pyrophosphorylase,phosphomannomutase, UDP-galactose 4-epimerase, galactosyl transferase,nucleotide sugar dehydrogenase, nucleotide sugar epimerase, andputative epimerase/dehydratase genes; and unknown genes K01953; Psort location: Cytoplasmic, score: 8.87.
       0.618
EEG73555.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.582
EEG73553.1
Glycosyltransferase, group 1 family protein; KEGG: pac:PPA0131 3.8e-61 putative glycosyl transferase K00754; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.547
wbpI
KEGG: gka:GK3162 3.4e-99 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 8.87.
  
    0.503
yfdH
Glycosyltransferase, group 2 family protein; KEGG: rpa:RPA4057 7.2e-74 possible dolichol phosphate mannose synthase K00721.
  
  
 0.475
wbpE
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: ava:Ava_0899 2.5e-55 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K00811; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.465
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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