STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baiEKEGG: msm:MSMEG_2245 1.9e-11 bile-acid 7-alpha dehydratase; Psort location: Cytoplasmic, score: 8.87. (169 aa)    
Predicted Functional Partners:
gltD_1
Putative selenate reductase, YgfK subunit; KEGG: eci:UTI89_C3263 2.3e-196 ygfK; hypothetical protein YgfK K05299; Psort location: Cytoplasmic, score: 9.98.
  
 0.998
EEG74881.1
4Fe-4S binding domain protein; KEGG: tma:TM1425 8.6e-09 NADH dehydrogenase I chain F K00335; Psort location: Cytoplasmic, score: 8.87.
   
 0.997
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168.
  
 0.997
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.996
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.996
hndC_2
4Fe-4S binding domain protein; KEGG: tte:TTE0893 9.8e-244 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; Psort location: Cytoplasmic, score: 9.98.
  
 0.987
hndC_1
4Fe-4S binding domain protein; KEGG: chy:CHY_0732 1.0e-193 hydB; Fe-hydrogenase, beta subunit K00335; Psort location: Cytoplasmic, score: 9.98.
   
 0.987
baiB
AMP-binding enzyme; KEGG: hne:HNE_0099 6.5e-73 baiB; bile acid-coenzyme A ligase; Psort location: Cytoplasmic, score: 9.98.
 
 
 
 0.986
petC1
FAD dependent oxidoreductase; KEGG: mma:MM1656 5.6e-90 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.978
EEG75032.1
Hypothetical protein; KEGG: bth:BT0123 6.8e-07 NADH-ubiquinone oxidoreductase subunit K00334; Psort location: Cytoplasmic, score: 8.87.
   
 0.970
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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