STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxlGHypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (254 aa)    
Predicted Functional Partners:
yxlE
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.980
yxlF_4
ABC transporter, ATP-binding protein; KEGG: ava:Ava_3286 4.3e-37 ABC transporter-like K01990; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.976
immR_4
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.948
EEG74547.1
Hypothetical protein; KEGG: mka:MK1013 0.00032 ntpK; archaeal/vacuolar-type H+-ATPase subunit K K02124; Psort location: CytoplasmicMembrane, score: 9.97.
  
 
 0.741
EEG73212.1
KEGG: fal:FRAAL1877 3.4e-28 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.701
EEG72932.1
KEGG: noc:Noc_2142 1.3e-37 ABC transporter, ATPase subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.700
EEG75144.1
KEGG: fal:FRAAL3681 1.7e-33 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.658
yxlF_6
KEGG: noc:Noc_2142 3.7e-38 ABC transporter, ATPase subunit; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.651
EEG72767.1
KEGG: lwe:lwe2158 9.0e-28 ABC transporter, ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.643
EEG75044.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0069 2.1e-38 ABC transporter component K01990; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.638
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.