STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG73191.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (49 aa)    
Predicted Functional Partners:
allE
Putative allantoin catabolism protein; Psort location: Cytoplasmic, score: 8.87.
       0.563
ridA
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 7.5e-24 ribonuclease UK114; Psort location: Cytoplasmic, score: 8.87.
       0.515
aes
Hypothetical protein; KEGG: bur:Bcep18194_B0145 3.6e-06 esterase/lipase/thioesterase K01046; Psort location: Cytoplasmic, score: 8.87.
       0.500
EEG73189.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.497
allD
Ureidoglycolate dehydrogenase; KEGG: bld:BLi01130 2.9e-125 yjmC; similar to malate dehydrogenase; RBL03081 K00073; Psort location: Cytoplasmic, score: 8.87; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.460
sucD_1
Putative membrane protein FdrA; KEGG: ape:APE_1072.1 8.3e-13 succinyl-CoA synthetase alpha chain K01902; Psort location: Cytoplasmic, score: 8.87.
       0.441
arcC-2
Carbamate kinase; KEGG: efa:EF2575 2.6e-92 arcC-4; carbamate kinase K00926; Psort location: Cytoplasmic, score: 8.87.
       0.417
lctP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.401
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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