STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hppA1V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily. (660 aa)    
Predicted Functional Partners:
hadI_1
Putative CoA-substrate-specific enzyme activase; KEGG: eci:UTI89_C5044 1.4e-40 yjiL; hypothetical protein YjiL K04111; Psort location: Cytoplasmic, score: 8.87.
       0.473
EEG73001.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.459
secD-2
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
       0.426
yeiR
CobW/P47K family protein; KEGG: reh:H16_A0195 1.2e-30 putative GTPase (G3E family); Psort location: Cytoplasmic, score: 8.87.
       0.426
nnr
YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
       0.420
EEG73002.1
2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: eci:UTI89_C5045 3.9e-59 yjiM; hypothetical protein YjiM K04111; Psort location: Cytoplasmic, score: 8.87.
       0.420
EEG72997.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.412
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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