STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG73017.1Putative protein, PH0010 family; KEGG: bbr:BB0737 1.6e-07 hpaD; homoprotocatechuate 2,3-dioxygenase K00455; Psort location: Cytoplasmic, score: 8.87. (465 aa)    
Predicted Functional Partners:
EEG73016.1
Radical SAM domain protein; KEGG: cac:CAC1421 3.5e-65 pyruvate-formate lyase-activating enzyme K04069; Psort location: Cytoplasmic, score: 8.87.
 
     0.939
EEG73018.1
Hypothetical protein; KEGG: tte:TTE1009 0.0048 sdaA2; L-serine deaminase K01752; Psort location: Cytoplasmic, score: 9.98; Belongs to the UPF0597 family.
       0.749
EEG73019.1
Hydrolase, NUDIX family; KEGG: lpl:lp_3123 4.4e-51 pyrophosphatase (putative) K03659; Psort location: Cytoplasmic, score: 8.87.
       0.693
nnr
YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
  
  
 0.606
vanW
G5 domain protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.524
EEG73015.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.493
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.481
pheT
KEGG: cno:NT01CX_1768 1.6e-197 pheT; phenylalanyl-tRNA synthetase, beta subunit K01888; Psort location: Cytoplasmic, score: 9.98.
       0.478
cmk_1
Hypothetical protein; KEGG: sat:SYN_01231 2.7e-28 cytidylate kinase K00945; Psort location: Cytoplasmic, score: 8.87.
  
    0.471
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.452
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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