STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG72715.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (70 aa)    
Predicted Functional Partners:
ywqN_1
Flavin reductase; KEGG: bpm:BURPS1710b_A0451 0.0042 NADPH-dependent FMN reductase family protein K00299; Psort location: Cytoplasmic, score: 8.87.
 
     0.814
EEG72713.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: tac:Ta0191 6.2e-36 probable glucose 1-dehydrogenase K04708; Psort location: Cytoplasmic, score: 9.98; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.809
EEG74506.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.709
oxyR
KEGG: shn:Shewana3_3435 1.8e-20 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
 
     0.686
bdhA_1
Alcohol dehydrogenase, iron-dependent; KEGG: bce:BC3721 1.2e-73 NADH-dependent butanol dehydrogenase A K00100; Psort location: Cytoplasmic, score: 9.98.
       0.668
EEG75883.1
4Fe-4S binding domain protein; KEGG: fnu:FN1223 7.1e-09 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; Psort location: Cytoplasmic, score: 8.87.
  
     0.644
EEG75386.1
Transcriptional regulator, GntR family.
  
     0.639
EEG72706.1
Hypothetical protein; KEGG: lmo:lmo0050 3.1e-07 similar to sensor histidine kinase (AgrC from Staphylococcus) K07706; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.628
bag
Hypothetical protein; KEGG: dme:Dmel_CG15021 1.8e-33 CG15021 K04707; Psort location: Cellwall, score: 9.17.
  
     0.623
EEG75716.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.615
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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