STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG72653.1Metallo-beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_1166 0.0063 metal-dependent hydrolase; Psort location: Cytoplasmic, score: 8.87. (309 aa)    
Predicted Functional Partners:
cinA_2
Competence/damage-inducible domain protein CinA; KEGG: mmu:319945 1.5e-07 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
      
 0.657
EEG73278.1
ABC transporter, solute-binding protein; KEGG: cdi:DIP0495 6.1e-09 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.509
gspF
Bacterial type II secretion system domain protein F; Psort location: CytoplasmicMembrane, score: 9.97.
  
  
 0.488
dprA
DNA protecting protein DprA; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.481
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.478
EEG75398.1
comF family protein; KEGG: reh:H16_A0339 2.4e-20 predicted amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.452
mraZ
Protein MraZ; Psort location: Cytoplasmic, score: 8.87; Belongs to the MraZ family.
  
    0.451
pilT
Twitching motility protein; KEGG: pen:PSEEN2333 2.7e-27 xcpR-2; type II secretion pathway protein E K01509; Psort location: Cytoplasmic, score: 9.36.
 
   
 0.441
EEG72654.1
Hypothetical protein.
       0.439
pheT
KEGG: cno:NT01CX_1768 1.6e-197 pheT; phenylalanyl-tRNA synthetase, beta subunit K01888; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.435
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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