STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_9151[e] hydrogenase H-cluster radical SAM maturase. (296 aa)    
Predicted Functional Partners:
C2E20_4803
Iron hydrogenase assembly.
  
   
 0.785
C2E20_8549
Bifunctional dihydrofolate reductase-thymidylate synthase.
     
 0.660
C2E20_7965
Phosphorylase.
     
 0.643
C2E20_6931
Phosphoribosylaminoimidazole chloroplastic.
    
 0.564
C2E20_4170
1-(5-phosphoribosyl)-5-amino-4-imidazole-car boxylate carboxylase.
    
 0.564
g356
Phosphoribosylaminoimidazole-succinocarboxam ide chloroplastic.
    
 0.564
C2E20_1895
NADH:ubiquinone oxidoreductase.
 
   
 0.561
C2E20_4595
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.552
C2E20_4053
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.552
C2E20_3017
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.552
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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