STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_77792-hydroxyacyl-lyase. (1128 aa)    
Predicted Functional Partners:
C2E20_2931
Acetolactate synthase small subunit chloroplastic-like.
  
 0.981
C2E20_2039
Isocitrate lyase; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.962
C2E20_6353
Alpha-acetolactate decarboxylase.
  
 
 0.900
C2E20_4103
Lipid transfer isoform A.
    
 0.830
C2E20_6523
Carnitine dehydratase.
  
 
 0.791
C2E20_2969
Peroxisome biogenesis 5.
 
  
 0.790
C2E20_3206
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.784
C2E20_3502
Dihydroxy-acid dehydratase.
  
 
 0.777
C2E20_1135
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.769
C2E20_1770
8-hydroxygeraniol dehydrogenase-like.
  
 
 0.754
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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