Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2E20_1347 | C2E20_7826 | A0A2P6VN13 | A0A2P6V3B3 | Peptidylprolyl isomerase. | Subunit of the chloroplast cytochrome b6f complex. | 0.964 |
C2E20_3465 | C2E20_7826 | A0A2P6VHD9 | A0A2P6V3B3 | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Subunit of the chloroplast cytochrome b6f complex. | 0.580 |
C2E20_7826 | C2E20_1347 | A0A2P6V3B3 | A0A2P6VN13 | Subunit of the chloroplast cytochrome b6f complex. | Peptidylprolyl isomerase. | 0.964 |
C2E20_7826 | C2E20_3465 | A0A2P6V3B3 | A0A2P6VHD9 | Subunit of the chloroplast cytochrome b6f complex. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.580 |
C2E20_7826 | C2E20_8434 | A0A2P6V3B3 | A0A2P6V1C3 | Subunit of the chloroplast cytochrome b6f complex. | Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.964 |
C2E20_8434 | C2E20_7826 | A0A2P6V1C3 | A0A2P6V3B3 | Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Subunit of the chloroplast cytochrome b6f complex. | 0.964 |