STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_7687Uracil phosphoribosyltransferase. (196 aa)    
Predicted Functional Partners:
C2E20_7576
Chromatin structure-remodeling complex SYD-like isoform X1.
    
 0.992
C2E20_7545
Uridine kinase 3.
  
  
0.968
C2E20_5534
Dihydropyrimidine dehydrogenase [NADP(+)].
   
 0.968
C2E20_7544
Uridine kinase; Belongs to the uridine kinase family.
     
 0.964
g711
Trifunctional nucleotide phosphoesterase; Belongs to the 5'-nucleotidase family.
   
 
  0.960
C2E20_5852
DNA topoisomerase I.
     
 0.945
C2E20_4288
Uridylate kinase.
   
 
 0.937
C2E20_4663
Putative uridine nucleosidase 2.
   
 0.929
C2E20_2184
5-C-terminal domain-containing; Belongs to the 5'-nucleotidase family.
   
 
  0.909
g760
Trypsin-like serine protease; Belongs to the peptidase S1 family.
    
 0.716
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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