STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_6841Ribosome recycling factor. (170 aa)    
Predicted Functional Partners:
C2E20_6314
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.971
C2E20_3568
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.951
C2E20_1721
U3 small nucleolar ribonucleo IMP3.
   
 
 0.951
C2E20_5663
40S ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.950
C2E20_8535
40S ribosomal S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.937
C2E20_5197
50S ribosomal L19.
  
 
 0.933
C2E20_7524
40S ribosomal S14-2; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.928
C2E20_6596
60S ribosomal L11-1; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.925
C2E20_4453
50S ribosomal L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.925
C2E20_5051
40S ribosomal S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.924
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.