STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_6766Phosphoglycerate mutase. (310 aa)    
Predicted Functional Partners:
C2E20_8746
Glycerophosphodiester phosphodiesterase GDE1 isoform A.
    
  0.661
C2E20_3972
LYR motif-containing 4; Belongs to the complex I LYR family.
    
 0.612
C2E20_8281
Ubiquitin-60S ribosomal L40.
    
  0.570
C2E20_3125
60S ribosomal L13a-2-like; Belongs to the universal ribosomal protein uL13 family.
   
   0.519
C2E20_2148
33kDa oxygen evolving of photosystem II.
    
 
 0.485
C2E20_6155
60S ribosomal L8-like.
   
 
 0.481
C2E20_3032
Ankyrin repeat protein.
    
 0.472
C2E20_8863
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.462
C2E20_1741
50S ribosomal chloroplastic.
   
   0.462
C2E20_8528
Uncharacterized protein.
    
 0.459
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.