STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_6683WD_REPEATS_REGION domain-containing protein. (861 aa)    
Predicted Functional Partners:
C2E20_7161
Starch branching enzyme.
  
 
 0.983
C2E20_3643
4-alpha-glucanotransferase.
  
 
 0.973
C2E20_7390
Starch branching enzyme isoform B.
  
 
 0.964
C2E20_3196
4-alpha-glucanotransferase DPE2.
  
 
 0.949
C2E20_5403
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
 
 
 0.938
C2E20_4340
Ornithine chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.931
C2E20_1935
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
    
 0.916
g495
Isoamylase chloroplastic.
  
 
 0.916
C2E20_5820
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
    
 0.915
C2E20_3420
Granule-bound starch.
  
 
 0.905
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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